Tutorial: Proteome Comparison Service¶
This set of short videos provides a step-by-step demonstration of using the PATRIC Proteome Comparison Service to identify insertions and deletions in up to nine target genomes that are compared with one reference, which can be a researcher’s private genome in PATRIC, a genome that has been annotated outside PATRIC, any of the publicly available genomes in PATRIC, or a set of proteins that you have saved in PATRIC as a feature group.
Using the Proteome Comparison Service¶
Links to the videos are provided below. They can also be viewed in order in the PATRIC YouTube channel playlist. Relevant references are provided at the bottom of this page.
Overbeek, R., et al., The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST). Nucleic acids research, 2014. 42(D1): p. D206-D214.